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URGI-Anagen
REPET-snakemake
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2 weeks ago
BARDET ETIENNE
@etienne.bardet
opened
merge request
!3
"REPET-snakemake full release"
at
URGI-Anagen /
REPET-snakemake
2 weeks ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
519e9475
· removed log from split_path_per_chromosome
2 weeks ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
e78903e5
· added repet_tools .whl file
2 weeks ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
137c05fc
· updated Cstfaf.py
2 weeks ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
54ba063d
· updated doc
2 weeks ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
6374cfd7
· updated envs in TEdenovo
2 weeks ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
fff5b0cf
· added Repeatmasker library to data dir
2 weeks ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
ebeb0144
· added option for using custom repeatmasker library
3 weeks ago
Mariene Wan
@mariene.wan
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
aa9181cc
· Add remote part for Singularity/Apptainer
1 month ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
581cb57a
· updated doc
1 month ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
9f997563
· updated doc
1 month ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
65dc2e50
· modified rule cat_all in TEannot
... and 1 more commit.
Compare
9c7b1122...65dc2e50
1 month ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
9c7b1122
· updated LaunchBlaster.py and corrected some typos
1 month ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
7abcec52
· added options to modify TEdenovo preprocess
1 month ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
2ca39270
· changed internal variables
1 month ago
BARDET ETIENNE
@etienne.bardet
closed
merge request
!2
"REPET V4 PASTEC release"
at
URGI-Anagen /
REPET-snakemake
1 month ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
6969d553
· Prototyped step 6 parallelization
... and 1 more commit.
Compare
ebaf871c...6969d553
2 months ago
BARDET ETIENNE
@etienne.bardet
approved
merge request
!2
"REPET V4 PASTEC release"
at
URGI-Anagen /
REPET-snakemake
2 months ago
BARDET ETIENNE
@etienne.bardet
opened
merge request
!2
"REPET V4 PASTEC release"
at
URGI-Anagen /
REPET-snakemake
2 months ago
BARDET ETIENNE
@etienne.bardet
pushed to branch
dev
at
URGI-Anagen /
REPET-snakemake
ebaf871c
· fixed error in image pull command
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