diff --git a/assets/multiqc_config.yaml b/assets/multiqc_config.yaml index c83e60d5ead2f356c11ab8ca3964173926ce4331..e75ff31b07d17537796e229cc1f2077991be9e98 100644 --- a/assets/multiqc_config.yaml +++ b/assets/multiqc_config.yaml @@ -55,6 +55,10 @@ remove_sections: - fastp-seq-content-gc - flash-histogram +section_comments: + fastqc_sequence_counts: "Tips : Use this graph to visualize the amount of each samples. Shouldn't be use to determine the proportion of duplicated reads (see 'General Statistics')." + sortmerna: "Total rRNA percentage is available in the 'General Statistics'. Non-rRNA sequences are NOT USED for this graph." + module_order: - fastqc: name: "ReadsStats" @@ -69,6 +73,7 @@ module_order: - fastq_screen: name: "ContaminationSearch" #info: "This section shows the module with different files" + info: "This analysis is performed by permissive alignments using BWA, which display a certain amount of false positive hits. Thus, don't worry if a low percentage of contamination is present. This analysis has limited interest on transcriptomic reads.<br>" target: "FastQ-Screen" - sortmerna: name: "ContaminationSearch - rRNA"